Biocides

The book groups biocides by how they attack organisms and, critically, by whether they can reach cells sheltered inside biofilm. The recurring lesson is that the limiting factor is access, not potency, so no single biocide controls established biology on its own.

Biocide or classTypeMode of actionStrengthsLimits
ChlorineOxidizingSteals electrons indiscriminately, damaging membranes, denaturing proteins, disrupting metabolismFast, suppresses planktonic populations, limits new colonizationpH sensitive (HOCl falls sharply above pH 8), consumed by EPS, attacks metals, elastomers, inhibitors
BromineOxidizingOxidation, same blunt electron-stealing mechanism as chlorineFast, holds a higher fraction of active form at elevated pH, suited to alkaline cooling towersConsumed by EPS before reaching inner cells, attacks unintended targets (metals, elastomers, inhibitors)
Chlorine dioxide (ClO₂)OxidizingOxidationFast-acting, pH stableOxidant, so consumed by EPS matrix like other oxidizers
IsothiazoloneNon-oxidizingTargets specific biological functions (cell division, enzyme activity, membrane integrity)Penetrates EPS better than oxidants, reaches sheltered zones, periodic slug doseDormant or slowed cells wait out exposure, selection pressure builds, rotate chemistries
GlutaraldehydeNon-oxidizingTargets specific biological functionsPenetrates EPS better than oxidants, reaches locations oxidizers cannotDormancy resistance, selection with repeated use, rotate chemistries
DBNPANon-oxidizingTargets specific biological functionsPenetrates EPS better than oxidants, periodic slug dose for biofilmDormancy resistance, selection with repeated use, rotate chemistries
Quaternary aminesNon-oxidizingTargets specific biological functions (membrane integrity)Penetrates EPS better than oxidants, reaches sheltered surfacesDormancy resistance, selection with repeated use, rotate chemistries
Heat (thermal)ThermalDenatures proteins at sufficient temperature and exposure time, no reliance on chemistry or metabolismMost honest biocide, no pH dependence, no selective chemistry, no uptake neededMust reach every surface long enough, biofilms insulate, dead legs stay cool, partial heating leaves survivors

Biofilm · Microbiologically influenced corrosion (MIC) · Sulfate-reducing bacteria (SRB) · Iron-related bacteria (IRB) · Acid-producing bacteria (APB) · Mechanical cleaning · Quorum sensing · Legionella


Part of The Blueprint of Water